![]()
Able, K.W., Studholme, A.L., and Menaderson, J.P. 1995. Habitat quality in the New York/New Jersery harbor estuary: An evaluation of pier effects on fishes. Final Report to the Hudson River Foundation. Rutgers University Marine Field Station, Tuckerton, NJ.
Able, K. W., J. P. Manderson, A. L. Studholme. 1998. The distribution of shallow water juvenile fishes in an urban estuary: The effects of man-made structures in the lower Hudson River. Estuaries 21:731-744
Able, K. W., J. P. Manderson, A. L. Studholme. 1999. Habitat quality for shallow water fishes in an urban estuary: The effects of man-made structures on growth. Marine Ecology Progress Series 187:227-235.
Adams, D. A., J. S. O'Connor, and S. B. Weisberg. 1998. Sediment quality of the NY/NJ Harbor system: an investigation under the regional environmental assessment program (R-EMAP). U.S. Environmental Protection Agency - Region 2, Edison, NJ. EPA/902/R-98/001.
Adams, D. A., and S. Benyi. 2003. Sediment quality of the NY/NJ Harbor system: a 5-year revisit. U.S. Environmental Protection Agency. EPA/902/R-98/001.
Allen, K. O., and J. W. Hardy. 1980. Impacts of navigational dredging on fish and wildlife: a literature review. US Fish and Wildlife Service, FWS/OBS-80/70, Washington, DC.
Bain, M. B., and M. S. Meixler. 2006a. Ecosystem management planning: setting a target community for river rehabilitation. Unpublished manuscript submitted to Environmental Management.
Bain, M. B., and M. S. Meixler. 2006b. Defining a target fish community for river restoration. Environmental Biology of Fishes. In press.
Bak, P. 1996. How nature works. Copernicus, New York, New York.
Beninger, P. G., and S. D. St. Jean. 1997. The role of mucus in particle processing by suspension feeding marine bivalves: unifying principles. Marine Biology 129:389-397.
Blanchard, A. L. and H. M. Feder. 2003. Adjustment of benthic fauna following sediment disposal at a site with multiple stressors in Port Valdez, Alaska. Mar Pollut Bull 46:1590-9.
Bostrom, C., and J. Matilla. 1999. The relative importance of food and shelter for seagrass associated invertebrates: a latitudinal comparison of habitat choice by isopod grazers. Oecologia 120:162-170.
Bricelj, V. M., S. P. MacQuarrie, and R. A. Schaffner. 2001. Differential effects of Aureococcus anophagefferens isolates ("brown tide") in unialgal and mixed suspension on bivalve feeding. Marine Biology 139:605-615.
Brown, L. 2004. The mapping of Eelgrass (Zostera spp) in Studland Bay. http://www.durlstonmarineproject.co.uk/research_eelgrass.asp
Cantelmo, F. R., and C. H. Wahtola, Jr. 1992. Aquatic habitat impacts of pile-supported and other structures in the lower Hudson River. Pages 59-75 in W. Wise, D. J. Suszkoski, and J. R. Waldman (eds.) Proceedings: Conference on the impacts of New York Harbor development on aquatic resources. Hudson River Foundation, New York, NY.
Chalermwat, K., T. R. Jacobson, and R. A. Lutz. 1991. Assimilation of bacteria by the dwarf surf clam Mulina lateralis (Bivalvia: Mactricidae). Marine Ecology Progress Series 71:27-35.
Chester, M.C. 1993. Comparative feeding biology of Acteocina canaliculata (Say, 1826) and Haminoea solitaria (Say, 1822) (Opisthobranchia: Cephalaspidea). American Malacological Bulletin 10:93-101.
Collette, B. B., and G. Klein MacPhee, editors. 2002. Bigelow and Schroeder’s Fishes of the Gulf of Maine. Smithsonian Institution Press, Washington, DC.
Conner, W. G., and J. L. Simon. 1979. The effects of oyster shell dredging on an estuarine benthic community. Estuarine and Coastal Marine Science 9:749-758.
Connor, D. W., J. H. Allen, N. Golding, K. L. Howell, L. M. Lieberknecht, K. O. Northern and J. B. Reker. 2004. The marine habitat classification for Britain and Ireland, Version 04.05 JNCC, Peterborough. http:// www.jncc.gov.uk/MarineHabitatClassification
Duffy-Anderson, J. T., J. P. Manderson, and K. W. Able. 2003. A characterization of juvenile fish assemblages around man-made structures in the New York-New Jersey Harbor estuary, U.S.A. Bulletin of Marine Science 72:877-889.
Dyrynda, P.E.J. 2004. Marine Biodiversity an introduction. http://www.solaster-mb.org/mb/
Franz, D.R. and W.H. Harris. 1988. Seasonal and spatial variability in macrobenthos communities in Jamaica Bay, New York an urban estuary. Estuaries 11:15-28.
Froese, R., and D. Pauly, Editors. 2005. FishBase. http:// www.fishbase.org/
Gibson, G. R., M. L. Bowman, J. Gerritsen, and B. D. Snyder. 2000. Estuarine and coastal marine waters: bioassessment and biocriteria technical guidance. U.S. Environmental Protection Agency, Washington, DC. EPA 822-B-00-024
Gilbert, W. H., and E. F. Suchow. 1977. Predation by winter flounder Psuedopleuronectes americanus on the siphons of the clam Tellina agilis. Nautilus 91:16-17.
Granger, S., M. Traber, S. W. Nixon, and R. Keyes. 2002. A practical guide for the use of seeds in eelgrass (Zostera marina L.) restoration. Part I. Collection, processing, and storage. M. Schwartz (ed.), Rhode Island Sea Grant, Narragansett, RI.
Gulf of Maine Biogeographic Information System. 2004. Bay of Fundy species information system. http://gmbis.marinebiodiversity.ca/BayOfFundy/search.html
Hardy Jr., J. D. 1978. Development of fishes of the Mid-Atlantic Bight: and atlas of egg, larval and juvenile stages Volume VI. U. S. Department of the Interior and the Center for Environmental and Estuarine Studies, University of Maryland, Solomons, Maryland.
Hughes, R. N. and D. Drewett. 1985. A comparison of the foraging behavior of dogwhelks, Nucella lapillus (L.), feeding on barnacles of mussels on the shore. Journal of Molluscan Studies 51:73-77.
Hurst, T. P. , K. A. McKown, and D. O. Conover. 2004. Interannual and long term variation in the near-shore fish community of the mesohaline Hudson River estuary. Estuaries 27:659-669.
Ingalls, A. E., R. C. Aller, C. Lee, and M. Y. Sun. 2000. The influence of deposit feeding on chlorophyll a degradation in coastal marine sediments. Journal of Marine Research 58:631-651.
Iocco, L. E., P. Wilber, R. J. Diaz, D. G. Clarke, and R. J. Will. 2000. Benthic habitats of the New York/New Jersey Harbor: 1995 survey of Jamaica, Upper, Newark, Bowery, and Flushing Bays. National Oceanic and Atmospheric Administration, Coastal Services Center, Charleston, SC.
Jenkins, R. E., and N. M. Burkhead. 1993. Freshwater Fishes of Virginia. American Fisheries Society, Bethesda, MD.
Johnston, Jr., S. A. 1981. Estuarine dredge and fill activities: a review of impacts. Environmental Management 5:427-440.
Kaag, N. H. B. M., E. M. Foekema, M. C. T. Scholten, and N. M. Vanstraalen. 1997. Comparison of contaminant accumulation in three species of marine invertebrates with different feeding habits. Environmental Toxicology and Chemistry 16:837-842.
Lewis, M. A., D. E. Weber, R. S. Stanley and J. C. Moore. 2001. Dredging impact on an urbanized Florida bayou: effects on benthos and algal-periphyton. Environmental Pollution 115:161-171.
Lobb, M. D., III, and D. J. Orth. 1991. Habitat use by an assemblage of fish in a large warmwater stream. Transactions of the American Fisheries Society 120:65-78.
Lopez, G. R., and I. J. Cheng. 1983. Synoptic measurements of ingestion rate, ingestion selectivity,and absoprtion efficiency of natural foods in the deposit feeding mollusks, Nucula annulata bivalvia and Hydrobia totteni gastropoda. Marine Ecology Progress Series 11:55-62.
Mandelbrot, B. 1983. The fractal geometry of nature. Freeman, New York, New York.
Marine Biological Association. 2004. Marine Life Information Network for Britain and Ireland. http://www.marlin.ac.uk/
Marine Biological Laboratory. 2004. Marine organisms. Woods Hole, MA. http://www.mbl.edu/marine_org/
Martino, E. J., and K. W. Able. 2003. Fish assemblages across the marine to low salinity transition zone of a temperate estuary. Estuarine Coastal and Shelf Science 56:969-987.
Meixler, M., and A. Eleria. 2005. Defining a target fish community for the Charles River in Massachusetts. Charles River Watershed Association, Waltham, MA.
Morgan, S.G. 1992. Predation by planktonic and benthic invertebrates on larvae of estuarine crabs. Journal of Experimental Marine Biology and Ecology 163: 91-110.
Museum of Paleontology. 2004. University of California, Berkeley, CA. http://www.ucmp.berkeley.edu/
Museum Victoria. 2004. Marine Crustaceans of Southern Australia. Victoria, Australia. http://www.mov.vic.gov.au/crust/page1a.html
Nelson, D. M., and M. E. Monaco. 2000. National overview and evolution of NOAA's Estuarine Living Marine Resources (ELMR) Program. National Oceanic and Atmospheric Administration Technical Memo NOS NCCOS CCMA-144.
New York Department of Environmental Conservation. 1991. Stream Biomonitoring Unit, Macroinvertebrate Species List. New York Department of Environmental Conservation, Albany, NY.
New York City Department of Environmental Protection. 2003. 2002 New York Harbor water quality report. New York City Department of Environmental Protection, New York, NY.
Oakden, J. M. 1984. Feeding and substrate preference in five species of phoxocephalid amphipods from central California. Journal of Crustacean Biology 4:233-247.
Ping, L. Y. 2004. Raffles Museum of Biodiversity Research, The National University of Singapore. http://rmbr.nus.edu.sg/polychaete/
Plafkin, J. L., M. T. Barbour, K. D. Porter, S. K. Gross, and R. M. Hughes. 1989. Rapid assessment protocols for use in streams and rivers: benthic macroinvertebrates and fish. U. S. Environmental Protection Agency, Washington, D.C. EPA-444/4-89-001
Rosenberg, D. M., and V. H. Resh, Editors. 1993. Freshwater biomonitoring and benthic macroinvertebrates. Chapman & Hall, New York, NY.
Ramel, G. 2004. EarthLife web. http://www.earthlife.net/inverts/
Rhodes, M.C and R.J. Thompson. 1993. Comparative physiology of suspension feeding in living brachiopods and bivalves: evolutionary implications. Paleobiology 19(3): 322-334.
Ricklefs, R.E., and G. L. Miller. 2000. Ecology. W.H. Freeman and Co., New York, New York.
Riisgard, H. U., and D. F. Seerup. 2003. Filtration rates in the soft clam Mya arenaria: effects of temperature and body size. Sarsia 88:415-428
Rouse, G. W., and F. Pleijel. 2001. Polychaetes. Oxford University Press, New York, NY.
Schoener, T. W. 1974. Resource partitioning in ecological communities. Science 185:27-39.
Science Daily. 2004. Glycera. http://www.sciencedaily.com/encyclopedia/glycera
Shimek, R. 2004. Odd critters. http://www.rshimek.com/
Silliman, B. R., C. A. Layman, and A. H. Altieri. 2003. Symbiosis between an Alpheid shrimp and a Xanthoid crab in salt marshes of mid Atlantic states, U.S.A. Journal of Crustacean Biology 23:876879.
Smith, C. L. 1985. The inland fishes of New York State. New York Department of Environmental Conservation, Albany, NY.
Soil and Water Conservation Society of Metro Halifax. 2004. Freshwater benthic ecology and aquatic entomology homepage. Nova Scotia, Canada. http://lakes.chebucto.org/ZOOBENTH/BENTHOS/benthos.html
Solé, R., and B. Goodwin. 2000. Signs of life: how complexity pervades biology. Basic Books, New York, New York, USA.
Steimle, F.W., and J. Caracciolo-Ward. 1989. A reassessment of the status of the benthic macrofauna of the Raritan Estuary. Estuaries 12:145-156.
Steinberg, N., D. J. Suszkowski, L. Clark, and J. Way. 2004. Health of the harbor: The first comprehensive look at the state of the NY/NJ Harbor Estuary. Report to the NY/NJ Harbor Estuary Program, Hudson River Foundation, New York, NY.
Stone, S., T. Lowry, J. Field, C. Williams, D. Nelson, S. Jury, M. Monaco, and L. Andreasen. 1994. Distribution and abundance of fishes and invertebrates in Mid-Atlantic estuaries. National Oceanic and Atmospheric Administration Estuarine Living Marine Resources Report 12. National Oceanic and Atmospheric Administration/National Ocean Service, SEA Division, Silver Spring, MD.
Taylor, D. L., and M. A. Peck. 2004. Daily energy requirements and trophic positioning of the sand shrimp Crangon septemspinosa. Marine Biology 145:167-177.
Thayer, G. W., W. J. Kenworthy, and M. S. Fonseca. 1984. The ecology of eelgrass meadows of the Atlantic coast: a community profile. U. S. Fish and Wildlife Service FWS/OBS-84/02.
The International Commission for the Scientific Exploration of the Mediterranean Sea. 2004. CIESM Atlas of Exotic Species in the Mediterranean Sea. http://www.ciesm.org/atlas/Rhithropanopeusharrisii.html
Thomas, K. A. 1993. The functional morphology of the digestive system of Lyonsia hyalina Conrad, 1831 (Bivalvia: Anomalodesmata: Pandoroidea). Journal of Molluscan Studies 59:175-186.
Todd, J. A. 2004. Neogene biology of tropical America, bivalve life habits database. London, UK. http://porites.geology.uiowa.edu/database/bivalves/Bivalve_eco.html
United Kingdom Marine Special Areas of Conservation. 2001. Zostera. http://www.ukmarinesac.org.uk/zostera.htm
United Kingdon Marine Special Areas Conservation. 2004. Marine communities. http://www.ukmarinesac.org.uk/index.htm
The University of Michigan Museum of Zoology. 2004. Animal diversity web. http://animaldiversity.ummz.umich.edu/site/index.html
Valentine, J. W., K. Roy, and D. Jablonski. 2002. Carnivore/non-carnivore ratios in northeastern Pacific marine gastropods. Marine Ecology Progress Series 228:153-163.
Weisberg, S. B., J. A. Ranasinghe, D. M. Dauer, L. C. Schaffner, R. J. Diaz, and J. B. Frithsen. 1997. An estuarine benthic index of biotic integrity (B-IBI) for Chesapeake Bay. Estuaries 20:149-158.
Weisberg, S. B., J. A. Ranasinghe, J. S. O’Connor, and D. A. Adams. 1998. A benthic index of biotic integrity (B-IBI) for the New York/New Jersey Harbor. In Sediment quality of the NY/NJ Harbor system: An investigation under the Regional Environmental Monitoring and Assessment Program (REMAP). U.S. Environmental Protection Agency - Region 2, Edison, NJ. EPA/902/R-98/001.
Werner, E. E., D. J. Hall, D. R. Laughlin, D. J. Wagner, L. A. Wilsmann, and F. C. Funk. 1977. Habitat partitioning in a freshwater fish community. Journal of the Fisheries Research Board of Canada 34:360-370.
Whitman, K. L., J. J. McDermott, and M. S. Oehrleinc. 2001. Laboratory studies on suspension feeding in the hermit crab Pagurus longicarpus (decapoda: anomura: paguridae). Journal of Crustacean Biology 21:582592.
Woodhead, P. M., T. Rotunno and S. Zappala. 1999. New York Harbor assessment project: biological assessment of fish habitat associated with shipping piers in New York Harbor. Marine Sciences Research Center, SUNY at Stony Brook, Stony Brook, NY.
Woodhead, P. M., T. Rotunno, and S. Zappala. 2000. Ecological surveys at the project test-site in New York Harbor. Marine Sciences Research Center, SUNY at Stony Brook, Stony Brook, NY.
Woodhead, P. M. J., Rohlf, F. J., and O'Hare, M. A. 1992. The structure of the fish community and distribution of major species in the lower Hudson estuary and New York Harbor. Final report to Hudson River Foundation, Marine Sciences Research Center, SUNY at Stony Brook, Stony Brook, NY.
Young, C. M., and J. L. Cameron. 1989. Differential predation by barnacles upon larvae of two bryozoans: spatial effects at small scales. Journal of Experimental Marine Biology and Ecology 128:283-294.
Yozzo, D. J., and F. Ottman. 2003. New Distribution records for the Spotfin Killifish, Fundulus luciae (Baird), in the lower Hudson River Estuary and adjacent waters. Northeastern Naturalist 10:399-408.